STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109995167Bloodthirsty-related gene family, member 12. (570 aa)    
Predicted Functional Partners:
ENSLBEP00000003230
Zgc:113337.
  
     0.478
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.464
LOC109995172
Zinc finger protein 219.
    
 0.455
mst1r
Macrophage stimulating 1 receptor b.
  
 
  0.442
LOC109992891
Growth arrest-specific 7a.
    
  0.429
LOC109988571
Growth arrest specific 7.
    
  0.429
LOC110002606
Si:ch211-113g11.6; Belongs to the semaphorin family.
  
   
 0.422
rps27a
Ribosomal protein S27a.
    
  0.421
ENSLBEP00000027096
Si:ch211-66e2.5.
  
     0.417
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.