STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000003498Ion_trans domain-containing protein. (245 aa)    
Predicted Functional Partners:
ENSLBEP00000003437
LSDAT_euk domain-containing protein.
 
  
 0.983
ENSLBEP00000024292
LSDAT_euk domain-containing protein.
 
  
 0.975
ENSLBEP00000003773
LSDAT_euk domain-containing protein.
 
  
 0.967
nudt5
Nudix (nucleoside diphosphate linked moiety X)-type motif 5; Belongs to the Nudix hydrolase family.
    
 0.880
LOC109991219
ANK_REP_REGION domain-containing protein.
     
 0.870
trpv4
Transient receptor potential cation channel, subfamily V, member 4.
     
 0.870
LOC109993699
Transient receptor potential cation channel, subfamily V, member 6; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.870
LOC109996016
Transient receptor potential cation channel, subfamily V, member 1; Belongs to the transient receptor (TC 1.A.4) family.
     
0.870
ENSLBEP00000038835
Ion_trans domain-containing protein.
     
 0.870
nudt14
Nudix (nucleoside diphosphate linked moiety X)-type motif 14.
    
 0.865
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.