STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109988227Myotubularin related protein 7b. (662 aa)    
Predicted Functional Partners:
LOC109992449
Zgc:154055.
  
0.935
mtmr9
Myotubularin related protein 9.
  
0.932
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.895
FIG4
FIG4 phosphoinositide 5-phosphatase.
   
 
 0.886
pikfyve
Phosphoinositide kinase, FYVE finger containing.
     
 0.882
LOC109993643
SAC1 like phosphatidylinositide phosphatase a.
     
 0.873
mtmr3
Myotubularin related protein 3.
    
0.872
mtmr2
Myotubularin related protein 2.
  
 
0.871
ENSLBEP00000007591
Uncharacterized protein.
 
  
 0.868
ENSLBEP00000002477
SAC domain-containing protein.
     
 0.867
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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