STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000003958Uncharacterized protein. (329 aa)    
Predicted Functional Partners:
cdca5
Cell division cycle associated 5.
   
    0.581
dtl
Denticleless E3 ubiquitin protein ligase homolog (Drosophila).
   
  
 0.566
mcm10
Minichromosome maintenance 10 replication initiation factor.
   
  
 0.493
ENSLBEP00000000113
Excision repair cross-complementation group 6-like.
   
  
 0.477
LOC110004130
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 
 0.433
LOC109997619
Uncharacterized protein.
  
     0.416
ect2
Epithelial cell transforming 2.
   
  
 0.415
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 
 0.409
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.