STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109999252PRELI/MSF1 domain-containing protein. (204 aa)    
Predicted Functional Partners:
sumf1
Sulfatase modifying factor 1.
    
  0.594
LOC109993114
Phospholipase.
   
 
 0.591
LOC109997072
Phospholipase.
   
 
 0.591
LOC109999597
Phospholipase.
   
 
 0.591
PPTC7
Protein phosphatase; Belongs to the PP2C family.
   
   0.587
LOC109981167
Protein phosphatase; Belongs to the PP2C family.
   
   0.587
ENSLBEP00000006623
Uncharacterized protein.
    
  0.522
ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
  0.522
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 0.505
ugt8
UDP glycosyltransferase 8; Belongs to the UDP-glycosyltransferase family.
     
 0.500
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.