STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prrg2Proline rich Gla (G-carboxyglutamic acid) 2. (187 aa)    
Predicted Functional Partners:
nosip
Nitric oxide synthase-interacting protein; Negatively regulates nitric oxide production by inducing nitric oxide synthase translocation to actin cytoskeleton and inhibiting its enzymatic activity; Belongs to the NOSIP family.
      
 0.557
laptm4a
Lysosomal protein transmembrane 4 alpha.
      
 0.556
rcn3
Reticulocalbin 3, EF-hand calcium binding domain.
      
 0.552
LOC109992957
Mediator complex subunit 25.
      
 0.545
LOC109990544
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
      
 0.518
LOC109990369
Shisa family member 9b.
      
 0.512
lrrc20
Leucine rich repeat containing 20.
      
 0.497
scaf1
SR-related CTD-associated factor 1.
      
 0.475
immp1l
Mitochondrial inner membrane protease subunit.
      
 0.472
ipo9
Importin 9.
      
 0.414
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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