Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109990369 | immp1l | ENSLBEP00000031744 | ENSLBEP00000002394 | Shisa family member 9b. | Mitochondrial inner membrane protease subunit. | 0.491 |
LOC109990369 | prrg2 | ENSLBEP00000031744 | ENSLBEP00000004124 | Shisa family member 9b. | Proline rich Gla (G-carboxyglutamic acid) 2. | 0.512 |
LOC109990369 | rcn3 | ENSLBEP00000031744 | ENSLBEP00000004296 | Shisa family member 9b. | Reticulocalbin 3, EF-hand calcium binding domain. | 0.491 |
LOC109990544 | prrg2 | ENSLBEP00000007048 | ENSLBEP00000004124 | Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. | Proline rich Gla (G-carboxyglutamic acid) 2. | 0.518 |
LOC109992957 | prrg2 | ENSLBEP00000004400 | ENSLBEP00000004124 | Mediator complex subunit 25. | Proline rich Gla (G-carboxyglutamic acid) 2. | 0.545 |
LOC109992957 | rcn3 | ENSLBEP00000004400 | ENSLBEP00000004296 | Mediator complex subunit 25. | Reticulocalbin 3, EF-hand calcium binding domain. | 0.491 |
LOC109992957 | scaf1 | ENSLBEP00000004400 | ENSLBEP00000019397 | Mediator complex subunit 25. | SR-related CTD-associated factor 1. | 0.531 |
immp1l | LOC109990369 | ENSLBEP00000002394 | ENSLBEP00000031744 | Mitochondrial inner membrane protease subunit. | Shisa family member 9b. | 0.491 |
immp1l | prrg2 | ENSLBEP00000002394 | ENSLBEP00000004124 | Mitochondrial inner membrane protease subunit. | Proline rich Gla (G-carboxyglutamic acid) 2. | 0.472 |
ipo9 | prrg2 | ENSLBEP00000016131 | ENSLBEP00000004124 | Importin 9. | Proline rich Gla (G-carboxyglutamic acid) 2. | 0.414 |
laptm4a | prrg2 | ENSLBEP00000027157 | ENSLBEP00000004124 | Lysosomal protein transmembrane 4 alpha. | Proline rich Gla (G-carboxyglutamic acid) 2. | 0.556 |
lrrc20 | prrg2 | ENSLBEP00000022125 | ENSLBEP00000004124 | Leucine rich repeat containing 20. | Proline rich Gla (G-carboxyglutamic acid) 2. | 0.497 |
nosip | prrg2 | ENSLBEP00000004267 | ENSLBEP00000004124 | Nitric oxide synthase-interacting protein; Negatively regulates nitric oxide production by inducing nitric oxide synthase translocation to actin cytoskeleton and inhibiting its enzymatic activity; Belongs to the NOSIP family. | Proline rich Gla (G-carboxyglutamic acid) 2. | 0.557 |
nosip | rcn3 | ENSLBEP00000004267 | ENSLBEP00000004296 | Nitric oxide synthase-interacting protein; Negatively regulates nitric oxide production by inducing nitric oxide synthase translocation to actin cytoskeleton and inhibiting its enzymatic activity; Belongs to the NOSIP family. | Reticulocalbin 3, EF-hand calcium binding domain. | 0.482 |
prrg2 | LOC109990369 | ENSLBEP00000004124 | ENSLBEP00000031744 | Proline rich Gla (G-carboxyglutamic acid) 2. | Shisa family member 9b. | 0.512 |
prrg2 | LOC109990544 | ENSLBEP00000004124 | ENSLBEP00000007048 | Proline rich Gla (G-carboxyglutamic acid) 2. | Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. | 0.518 |
prrg2 | LOC109992957 | ENSLBEP00000004124 | ENSLBEP00000004400 | Proline rich Gla (G-carboxyglutamic acid) 2. | Mediator complex subunit 25. | 0.545 |
prrg2 | immp1l | ENSLBEP00000004124 | ENSLBEP00000002394 | Proline rich Gla (G-carboxyglutamic acid) 2. | Mitochondrial inner membrane protease subunit. | 0.472 |
prrg2 | ipo9 | ENSLBEP00000004124 | ENSLBEP00000016131 | Proline rich Gla (G-carboxyglutamic acid) 2. | Importin 9. | 0.414 |
prrg2 | laptm4a | ENSLBEP00000004124 | ENSLBEP00000027157 | Proline rich Gla (G-carboxyglutamic acid) 2. | Lysosomal protein transmembrane 4 alpha. | 0.556 |
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