STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcb10ATP-binding cassette, sub-family B (MDR/TAP), member 10. (706 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
 0.840
LOC109981807
Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.
    
 0.775
abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
    
0.763
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.695
ENSLBEP00000018525
Uncharacterized protein.
   
 0.689
ENSLBEP00000019877
Ig-like domain-containing protein.
   
 0.689
ENSLBEP00000023388
Ig-like domain-containing protein.
   
 0.689
ENSLBEP00000026356
Uncharacterized protein.
   
 0.689
ENSLBEP00000034773
Ig-like domain-containing protein.
   
 0.689
LOC109979531
Uncharacterized protein.
   
 0.689
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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