STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLITRK1SLIT and NTRK like family member 1. (705 aa)    
Predicted Functional Partners:
LOC109984060
Protein tyrosine phosphatase receptor type Sa.
   
 0.836
LOC110006158
Uncharacterized protein.
   
 0.836
LOC109982509
Protein tyrosine phosphatase receptor type Fa.
   
 0.836
PTPRD
Protein tyrosine phosphatase receptor type D.
   
 0.836
LOC109980547
Protein tyrosine phosphatase receptor type Fb.
   
 0.836
LOC109989700
Protein tyrosine phosphatase receptor type Sa.
   
 0.836
PTPRD-2
Uncharacterized protein.
   
 0.836
LOC109975356
Vav 3 guanine nucleotide exchange factor b.
   
 0.817
ntng1
Netrin g1a.
   
 0.817
LOC109997634
Si:ch1073-186i23.1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.793
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.