STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109988834Nuclear receptor subfamily 1, group D, member 2a. (658 aa)    
Predicted Functional Partners:
ncor1
Nuclear receptor corepressor 1.
    
 0.899
ncor2
Nuclear receptor corepressor 2.
    
 0.899
ENSLBEP00000017934
Nuclear receptor subfamily 1, group H, member 5.
   
0.876
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
   
0.876
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
   
0.876
LOC109985589
Vitamin D receptor a.
   
0.837
LOC109993808
Vitamin D receptor b.
   
0.837
LOC109979667
Uncharacterized protein.
    
 0.823
LOC110002336
Uncharacterized protein.
   
 0.817
ncoa2
Nuclear receptor coactivator.
   
 0.817
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.