STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000004185Spectrin repeat containing, nuclear envelope 2b. (897 aa)    
Predicted Functional Partners:
ENSLBEP00000020089
Uncharacterized protein.
 
      0.897
ENSLBEP00000007494
Sad1 and UNC84 domain containing 1.
    
 0.856
sun2
SUN domain-containing protein.
    
 0.856
LOC109980174
Uncharacterized protein.
 
      0.807
LOC109999580
Uncharacterized protein.
 
  
  0.796
ENSLBEP00000006533
Uncharacterized protein.
 
  
  0.781
trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.696
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.687
ENSLBEP00000001956
SUN domain-containing protein.
    
 0.676
ENSLBEP00000007907
SUN domain-containing protein.
    
 0.676
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.