STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
meiocUncharacterized protein. (722 aa)    
Predicted Functional Partners:
ENSLBEP00000011245
YTH domain-containing protein.
    
 
 0.662
YTHDC2
YTH domain containing 2.
    
 
 0.662
ENSLBEP00000034304
Rad21_Rec8_N domain-containing protein.
     
 0.629
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.557
LOC110002449
Uncharacterized protein.
     
 0.556
LOC109985592
RAD21 cohesin complex component like 1.
     
 0.556
rad21
RAD21 cohesin complex component a.
     
 0.556
mei1
Uncharacterized protein.
      
 0.518
LOC109986325
YTH domain containing 1.
    
 
 0.511
xrn1
5'-3' exoribonuclease 1.
    
 
 0.469
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.