STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109989603Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (428 aa)    
Predicted Functional Partners:
kcnk1
Potassium channel subfamily K member.
     
0.721
LOC109992191
Potassium channel subfamily K member.
     
0.697
kcnk18
Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
     
0.666
LOC109997643
Protein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily.
     
 0.641
LOC109989210
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
     
 0.641
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
 0.641
kcnk9
Potassium channel subfamily K member.
   
 
0.563
LOC109992347
Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
   
 
0.563
kcnk3
Potassium channel subfamily K member.
   
 
0.563
LOC110001140
Potassium channel subfamily K member.
   
 
0.563
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.