STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109987105Uncharacterized protein. (1255 aa)    
Predicted Functional Partners:
LOC109991058
LRAT domain-containing protein.
   
 0.862
LOC109985465
LRAT domain-containing protein.
   
 0.862
pla2g15
Phospholipase A2, group XV.
     
 0.862
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
    
 0.861
lcat
Lecithin-cholesterol acyltransferase.
     
 0.858
pla2g4a
Phospholipase A2.
   
 
 0.856
LOC110003724
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
  
  0.850
LOC110004597
ANK_REP_REGION domain-containing protein.
  
  0.850
LOC109994457
Malate synthase-like.
  
 0.850
LOC109998103
PLA2c domain-containing protein.
   
 
 0.841
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.