Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSLBEP00000006855 | LOC109989819 | ENSLBEP00000006855 | ENSLBEP00000009703 | HTH myb-type domain-containing protein. | Uncharacterized protein. | 0.979 |
ENSLBEP00000006855 | blm | ENSLBEP00000006855 | ENSLBEP00000024461 | HTH myb-type domain-containing protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.588 |
ENSLBEP00000006855 | gar1 | ENSLBEP00000006855 | ENSLBEP00000020349 | HTH myb-type domain-containing protein. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.613 |
ENSLBEP00000006855 | pot1 | ENSLBEP00000006855 | ENSLBEP00000004711 | HTH myb-type domain-containing protein. | Protection of telomeres 1 homolog. | 0.936 |
ENSLBEP00000006855 | stn1 | ENSLBEP00000006855 | ENSLBEP00000011975 | HTH myb-type domain-containing protein. | CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. | 0.628 |
ENSLBEP00000006855 | terf1 | ENSLBEP00000006855 | ENSLBEP00000019249 | HTH myb-type domain-containing protein. | Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. | 0.875 |
ENSLBEP00000006855 | terf2ip | ENSLBEP00000006855 | ENSLBEP00000033300 | HTH myb-type domain-containing protein. | Uncharacterized protein. | 0.986 |
ENSLBEP00000006855 | tert | ENSLBEP00000006855 | ENSLBEP00000031507 | HTH myb-type domain-containing protein. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.649 |
ENSLBEP00000006873 | LOC109988732 | ENSLBEP00000006873 | ENSLBEP00000001787 | Uncharacterized protein. | TERF1 (TRF1)-interacting nuclear factor 2. | 0.992 |
ENSLBEP00000006873 | LOC109989819 | ENSLBEP00000006873 | ENSLBEP00000009703 | Uncharacterized protein. | Uncharacterized protein. | 0.986 |
ENSLBEP00000006873 | blm | ENSLBEP00000006873 | ENSLBEP00000024461 | Uncharacterized protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.835 |
ENSLBEP00000006873 | gar1 | ENSLBEP00000006873 | ENSLBEP00000020349 | Uncharacterized protein. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.711 |
ENSLBEP00000006873 | pot1 | ENSLBEP00000006873 | ENSLBEP00000004711 | Uncharacterized protein. | Protection of telomeres 1 homolog. | 0.972 |
ENSLBEP00000006873 | stn1 | ENSLBEP00000006873 | ENSLBEP00000011975 | Uncharacterized protein. | CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. | 0.706 |
ENSLBEP00000006873 | terf1 | ENSLBEP00000006873 | ENSLBEP00000019249 | Uncharacterized protein. | Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. | 0.892 |
ENSLBEP00000006873 | terf2ip | ENSLBEP00000006873 | ENSLBEP00000033300 | Uncharacterized protein. | Uncharacterized protein. | 0.994 |
ENSLBEP00000006873 | tert | ENSLBEP00000006873 | ENSLBEP00000031507 | Uncharacterized protein. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.725 |
LOC109988732 | ENSLBEP00000006873 | ENSLBEP00000001787 | ENSLBEP00000006873 | TERF1 (TRF1)-interacting nuclear factor 2. | Uncharacterized protein. | 0.992 |
LOC109988732 | LOC109989819 | ENSLBEP00000001787 | ENSLBEP00000009703 | TERF1 (TRF1)-interacting nuclear factor 2. | Uncharacterized protein. | 0.996 |
LOC109988732 | blm | ENSLBEP00000001787 | ENSLBEP00000024461 | TERF1 (TRF1)-interacting nuclear factor 2. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.702 |
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