Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
slc6a5Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (780 aa)    
Predicted Functional Partners:
LOC109998534
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
     
  0.877
gad2
Glutamate decarboxylase 2.
  
  
 0.699
dbx1
Developing brain homeobox 1a.
      
 0.640
evx2
Even-skipped homeobox 2.
      
 0.603
ENSLBEP00000021834
Si:dkey-83h2.3.
    
 
 0.575
tm4sf4
Transmembrane 4 L six family member 4.
    
 
 0.575
SLC17A6
Solute carrier family 17 member 6b.
   
  
 0.573
LOC109995580
Glutamate decarboxylase 1b.
  
  
 0.573
slc17a6
Solute carrier family 17 member 6.
   
  
 0.573
gad1
Glutamate decarboxylase 1a.
  
  
 0.573
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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