STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem17Transmembrane protein 17. (186 aa)    
Predicted Functional Partners:
b9d1
B9 protein domain 1.
    
 
 0.629
tmem231
Transmembrane protein 231.
    
 
 0.595
cc2d2a
Coiled-coil and C2 domain containing 2A.
    
 
 0.584
ENSLBEP00000025043
Uncharacterized protein.
   
  
 0.578
ENSLBEP00000029425
DUF1619 domain-containing protein.
      
 0.548
tmem67
Transmembrane protein 67.
      
 0.491
nphp1
Nephronophthisis 1.
      
 0.489
ttc25
Tetratricopeptide repeat domain 25.
      
 0.426
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
      
 0.416
tmem107
Transmembrane protein 107 like.
      
 0.402
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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