STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109992896Perforin 1.9. (582 aa)    
Predicted Functional Partners:
LOC109994563
Ig-like domain-containing protein.
   
  
 0.924
ENSLBEP00000007470
Saposin B-type domain-containing protein.
   
  
 0.916
ENSLBEP00000036155
Saposin B-type domain-containing protein.
   
  
 0.916
LOC109982580
Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family.
   
 0.884
ENSLBEP00000013630
IL2RB_N1 domain-containing protein.
   
  
 0.877
LOC109998319
Perforin 1.2.
  
  
 
0.834
ENSLBEP00000005157
C2 domain-containing protein.
  
  
 
0.833
LOC110001437
Perforin 1.3.
  
  
 
0.831
LOC109975245
Uncharacterized protein.
   
  
 0.784
LOC110002088
Uncharacterized protein.
   
  
 0.784
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.