STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109995799Uncharacterized protein; Belongs to the peptidase C14A family. (489 aa)    
Predicted Functional Partners:
fadd
Uncharacterized protein.
   
 0.990
cflar
Uncharacterized protein; Belongs to the peptidase C14A family.
   
0.986
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.982
apaf1
Apoptotic peptidase activating factor 1.
    
 0.976
LOC109995578
Receptor-interacting serine-threonine kinase 3.
   
 0.974
LOC109998157
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.970
tradd
Tnfrsf1a-associated via death domain.
    
 0.965
LOC109998914
Tumor necrosis factor receptor superfamily, member a.
    
 0.925
LOC109982580
Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family.
   
 0.923
ENSLBEP00000029041
CARD domain-containing protein.
   
 0.918
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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