STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000006138IGv domain-containing protein. (149 aa)    
Predicted Functional Partners:
LOC109986402
Afadin, adherens junction formation factor a.
    
 0.657
ENSLBEP00000006879
Calcium/calmodulin-dependent serine protein kinase b.
    
  0.549
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
  0.549
LOC109995105
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.549
LOC109990180
Junctional adhesion molecule 2a.
    
 0.538
jam3
Junctional adhesion molecule 3a.
    
 0.525
LOC109980789
Junctional adhesion molecule 3b.
    
 0.525
LOC109983007
Tight junction protein 1a; Belongs to the MAGUK family.
    
 0.500
LOC109989415
Tight junction protein 2b (zona occludens 2); Belongs to the MAGUK family.
    
 0.500
ENSLBEP00000004481
Uncharacterized protein.
    
 0.500
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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