STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109981969Cyclin Y; Belongs to the cyclin family. (356 aa)    
Predicted Functional Partners:
cdk15
Cyclin-dependent kinase 15; Belongs to the protein kinase superfamily.
    
 
 0.505
cdk14
Cyclin-dependent kinase 14; Belongs to the protein kinase superfamily.
    
 
 0.505
LOC109983157
Cyclin dependent kinase 18; Belongs to the protein kinase superfamily.
    
 
 0.472
LOC110003181
Cyclin dependent kinase 17; Belongs to the protein kinase superfamily.
    
 
 0.472
ENSLBEP00000021855
Protein kinase domain-containing protein.
    
 
 0.472
LOC110002531
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.472
LOC109996126
Protein kinase domain-containing protein.
    
 
 0.472
LOC109984592
Cyclin-dependent kinase 17; Belongs to the protein kinase superfamily.
    
 
 0.472
pithd1
PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1.
 
      0.412
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.