STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000006390Uncharacterized protein. (1045 aa)    
Predicted Functional Partners:
ENSLBEP00000021361
Uncharacterized protein.
 
      0.898
ENSLBEP00000006410
Xin actin binding repeat containing 2b.
 
      0.879
tex10
Testis expressed 10.
   
 0.766
LOC109985356
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.763
ENSLBEP00000033866
Uncharacterized protein.
   
  0.730
LOC109978095
Uncharacterized protein.
   
 0.719
LOC109979654
WD_REPEATS_REGION domain-containing protein.
   
 0.719
ENSLBEP00000012680
Uncharacterized protein.
 
      0.704
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.671
MYL2
Myosin light chain 2.
   
 0.671
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.