STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcapTitin-cap (telethonin). (180 aa)    
Predicted Functional Partners:
myoz1
Uncharacterized protein.
   
 
 0.770
GFAP
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
   
 
 0.716
csrp3
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
 
 0.651
LOC109985046
Vimentin like; Belongs to the intermediate filament family.
   
 
 0.650
LMNA
Lamin A/C; Belongs to the intermediate filament family.
   
 
 0.627
LOC109992029
Lamin A; Belongs to the intermediate filament family.
   
 
 0.627
LOC109984293
Myotilin.
   
  
 0.626
MYL2
Myosin light chain 2.
   
 0.613
mybpc3
Myosin binding protein C, cardiac.
   
 0.612
LOC109985345
Desmin a; Belongs to the intermediate filament family.
   
 
 0.603
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.