Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000006830Uncharacterized protein. (313 aa)    
Predicted Functional Partners:
LOC109999178
Uncharacterized protein.
 
     0.924
cntn2
Contactin 2.
   
 0.914
LOC109999986
Uncharacterized protein.
   
 0.807
cntn5
Contactin 5.
   
 0.704
LOC109996330
Contactin 1b.
   
 0.704
CNTN1
Contactin 1.
   
 0.704
LOC109983188
Contactin 4.
   
 0.704
LOC109983172
Contactin 3b.
   
 0.704
LOC109982864
Contactin 3a, tandem duplicate 2.
   
 0.704
LOC109982872
Contactin 3a, tandem duplicate 1.
   
 0.704
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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