STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000006855HTH myb-type domain-containing protein. (181 aa)    
Predicted Functional Partners:
terf2ip
Uncharacterized protein.
    
 0.986
LOC109989819
Uncharacterized protein.
    
 0.979
pot1
Protection of telomeres 1 homolog.
    
 0.936
ENSLBEP00000005132
Telo_bind domain-containing protein.
    
 0.936
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.894
terf1
Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.
    
 0.875
rad50
RAD50 homolog, double strand break repair protein.
    
 0.856
dclre1a
DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae).
    
 
 0.855
dclre1b
DNA cross-link repair 1B.
    
 
 0.855
ENSLBEP00000018855
SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae).
    
 
 0.847
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.