STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000006871IRG-type G domain-containing protein. (236 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
    
 0.693
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.608
prkn
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
  0.595
LOC109995863
Uncharacterized protein.
    
 0.571
ubb
Ubiquitin B.
   
  0.569
rps27a
Ribosomal protein S27a.
    
  0.568
becn1
Beclin 1, autophagy related.
    
 0.546
wdr90
WD repeat domain 90.
    
 
 0.526
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.513
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.508
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.