STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLKLMixed lineage kinase domain like pseudokinase. (446 aa)    
Predicted Functional Partners:
LOC109998157
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
0.993
LOC109995578
Receptor-interacting serine-threonine kinase 3.
   
0.993
pgam5
PGAM family member 5, serine/threonine protein phosphatase, mitochondrial.
    
 0.934
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
0.898
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
 0.884
ENSLBEP00000016462
NLRC4_HD2 domain-containing protein.
    
 0.879
ENSLBEP00000020734
NACHT domain-containing protein.
    
 0.879
LOC109982952
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
    
 0.878
LOC109982928
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
    
 0.878
chmp2a
Charged multivesicular body protein 2A.
    
 0.856
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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