STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109983073Tousled-like kinase 2. (700 aa)    
Predicted Functional Partners:
LOC110000748
Anti-silencing function 1Ba histone chaperone.
    
 
 0.816
ASF1B
Anti-silencing function 1Ba histone chaperone.
    
 
 0.816
cabin1
Calcineurin binding protein 1.
    
 
 0.632
LOC109992062
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
   
 
 0.418
SPATA1
Spermatogenesis associated 1.
    
   0.412
ENSLBEP00000011245
YTH domain-containing protein.
   
   0.406
YTHDC2
YTH domain containing 2.
   
   0.406
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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