STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110001527Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (206 aa)    
Predicted Functional Partners:
LOC109982950
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.996
LOC109990544
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
  
 0.996
rpl23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.996
rpl17
Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.996
rpl8
Ribosomal protein L8.
  
 0.996
LOC109994452
Ribosomal protein L26.
  
 0.996
rpl31
Ribosomal protein L31.
  
 0.996
rpl35
Ribosomal protein L35.
  
 0.996
rpl24
Ribosomal protein L24.
   
 0.995
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.