STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109984186Cytochrome P450, family 20, subfamily A, polypeptide 1. (468 aa)    
Predicted Functional Partners:
asmtl
Acetylserotonin O-methyltransferase-like.
     
 0.875
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.866
LOC109987455
Cytochrome b5 reductase 4.
   
 0.855
suox
Sulfite oxidase.
    
 0.852
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.852
pla2g4a
Phospholipase A2.
    
 0.847
rps28
Ribosomal protein S28.
    
  0.844
srd5a3
Steroid 5 alpha-reductase 3.
     
 0.832
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid.
  
 0.818
LOC109998600
Hydroxysteroid (17-beta) dehydrogenase 7.
    
 0.813
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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