STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109990023Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b. (599 aa)    
Predicted Functional Partners:
LOC110003253
Phosphatidylinositol 4-kinase, catalytic, beta; Belongs to the PI3/PI4-kinase family.
   
 0.883
LOC109998199
Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.
   
 0.879
LOC109991553
Phosphatidylinositol 4-kinase, catalytic, alpha b; Belongs to the PI3/PI4-kinase family.
   
 0.879
LOC109996897
Phosphoinositide phospholipase C.
   
 0.868
LOC109983108
Phosphoinositide phospholipase C.
   
 0.868
plce1
Phospholipase C, epsilon 1.
   
 0.868
synj1
Synaptojanin 1.
    
 0.868
plcd1
Phosphoinositide phospholipase C.
   
 0.868
plch1
Phosphoinositide phospholipase C.
   
 0.868
LOC109987120
Phosphoinositide phospholipase C.
   
 0.868
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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