STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110001541Arrestin_C domain-containing protein. (427 aa)    
Predicted Functional Partners:
txn2
Thioredoxin 2.
    
 0.670
ENSLBEP00000004591
NDK domain-containing protein.
    
 0.646
ENSLBEP00000030295
annotation not available
    
 0.646
LOC109988736
Thioredoxin; Belongs to the thioredoxin family.
    
 0.642
LOC109988737
Thioredoxin domain-containing protein.
    
 0.642
ENSLBEP00000004656
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.642
ENSLBEP00000013216
Uncharacterized protein.
    
  0.501
LOC110002597
P53-induced death domain protein 1.
    
  0.501
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
    
 0.480
ube2c
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.469
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.