STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109995264Uncharacterized protein. (599 aa)    
Predicted Functional Partners:
LOC109985914
Citron rho-interacting serine/threonine kinase b.
 
  
  0.914
ENSLBEP00000029048
CDC42 binding protein kinase beta (DMPK-like).
 
      0.894
ENSLBEP00000013525
Uncharacterized protein.
 
      0.883
ENSLBEP00000033866
Uncharacterized protein.
    
 0.809
LOC109981150
Ras homolog family member F.
  
 0.772
LOC109980884
Ras homolog family member Ca.
  
 0.747
rnd3
Rho family GTPase 3a.
  
 0.747
LOC109984913
Uncharacterized protein.
  
 0.747
LOC109993560
Uncharacterized protein.
  
 0.747
LOC109984918
Uncharacterized protein.
  
 0.747
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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