STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110001037C2 domain-containing protein. (400 aa)    
Predicted Functional Partners:
ENSLBEP00000004755
Uncharacterized protein.
     
 0.707
ENSLBEP00000004788
Uncharacterized protein.
     
 0.707
LOC109990056
Intersectin 2a.
     
 0.707
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.609
ENSLBEP00000031587
C2 domain-containing protein.
     
 0.609
ENSLBEP00000031622
PDZ domain-containing protein.
     
 0.609
LOC109987944
Intersectin 1 (SH3 domain protein).
     
 0.557
sh3rf3
SH3 domain containing ring finger 3.
    
  0.497
ENSLBEP00000028630
Adaptin_N domain-containing protein.
    
 0.484
LOC109993436
Uncharacterized protein.
   
 0.465
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.