Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109988722 | ikbkg | ENSLBEP00000001613 | ENSLBEP00000021682 | Ubiquitin-like domain-containing protein. | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | 0.674 |
LOC109988722 | optn | ENSLBEP00000001613 | ENSLBEP00000036603 | Ubiquitin-like domain-containing protein. | Optineurin. | 0.674 |
LOC109988722 | zc3h12b | ENSLBEP00000001613 | ENSLBEP00000008338 | Ubiquitin-like domain-containing protein. | Zinc finger CCCH-type containing 12B. | 0.563 |
LOC109996628 | ikbkg | ENSLBEP00000002311 | ENSLBEP00000021682 | NEDD8 ubiquitin like modifier, like. | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | 0.674 |
LOC109996628 | optn | ENSLBEP00000002311 | ENSLBEP00000036603 | NEDD8 ubiquitin like modifier, like. | Optineurin. | 0.674 |
LOC109996628 | zc3h12b | ENSLBEP00000002311 | ENSLBEP00000008338 | NEDD8 ubiquitin like modifier, like. | Zinc finger CCCH-type containing 12B. | 0.563 |
ikbkg | LOC109988722 | ENSLBEP00000021682 | ENSLBEP00000001613 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | Ubiquitin-like domain-containing protein. | 0.674 |
ikbkg | LOC109996628 | ENSLBEP00000021682 | ENSLBEP00000002311 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | NEDD8 ubiquitin like modifier, like. | 0.674 |
ikbkg | zc3h12b | ENSLBEP00000021682 | ENSLBEP00000008338 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | Zinc finger CCCH-type containing 12B. | 0.616 |
optn | LOC109988722 | ENSLBEP00000036603 | ENSLBEP00000001613 | Optineurin. | Ubiquitin-like domain-containing protein. | 0.674 |
optn | LOC109996628 | ENSLBEP00000036603 | ENSLBEP00000002311 | Optineurin. | NEDD8 ubiquitin like modifier, like. | 0.674 |
optn | zc3h12b | ENSLBEP00000036603 | ENSLBEP00000008338 | Optineurin. | Zinc finger CCCH-type containing 12B. | 0.616 |
sarnp | thoc3 | ENSLBEP00000033232 | ENSLBEP00000008452 | SAP domain containing ribonucleoprotein. | THO complex 3. | 0.867 |
sarnp | zc3h12b | ENSLBEP00000033232 | ENSLBEP00000008338 | SAP domain containing ribonucleoprotein. | Zinc finger CCCH-type containing 12B. | 0.524 |
thoc3 | sarnp | ENSLBEP00000008452 | ENSLBEP00000033232 | THO complex 3. | SAP domain containing ribonucleoprotein. | 0.867 |
thoc3 | zc3h12b | ENSLBEP00000008452 | ENSLBEP00000008338 | THO complex 3. | Zinc finger CCCH-type containing 12B. | 0.511 |
zc3h12b | LOC109988722 | ENSLBEP00000008338 | ENSLBEP00000001613 | Zinc finger CCCH-type containing 12B. | Ubiquitin-like domain-containing protein. | 0.563 |
zc3h12b | LOC109996628 | ENSLBEP00000008338 | ENSLBEP00000002311 | Zinc finger CCCH-type containing 12B. | NEDD8 ubiquitin like modifier, like. | 0.563 |
zc3h12b | ikbkg | ENSLBEP00000008338 | ENSLBEP00000021682 | Zinc finger CCCH-type containing 12B. | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | 0.616 |
zc3h12b | optn | ENSLBEP00000008338 | ENSLBEP00000036603 | Zinc finger CCCH-type containing 12B. | Optineurin. | 0.616 |
page 1 of 2