STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109976872Uncharacterized protein. (217 aa)    
Predicted Functional Partners:
LOC109987761
Heterogeneous nuclear ribonucleoprotein M.
   
 0.891
snrpf
Small nuclear ribonucleoprotein polypeptide F.
   
 0.842
snrpg
Small nuclear ribonucleoprotein G.
   
 0.826
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.821
LOC109997136
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.821
snrpd3
Small nuclear ribonucleoprotein Sm D3.
   
 0.806
rbmx
RNA binding motif protein X-linked.
   
 0.805
snrpd2
Small nuclear ribonucleoprotein Sm D2.
   
 0.805
sf3b1
Splicing factor 3b, subunit 1.
   
 0.797
sf3b2
Splicing factor 3b, subunit 2.
   
 0.791
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.