STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltpGlycolipid transfer protein a. (209 aa)    
Predicted Functional Partners:
cope
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
    0.479
SPAM1
Hyaluronidase.
   
 0.450
LOC109995731
ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
   
 0.450
SPAM1-2
Hyaluronidase.
   
 0.450
SPAM1-3
Hyaluronidase.
   
 0.450
LOC109984800
Hyaluronidase.
   
 0.450
LOC109984816
Hyaluronidase.
   
 0.450
LOC109983098
ADP-ribosylation factor-like 5C; Belongs to the small GTPase superfamily. Arf family.
   
 0.450
LOC109993544
Hyaluronidase.
   
 0.450
ENSLBEP00000010172
Uncharacterized protein.
   
 0.450
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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