STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109991819Guanine nucleotide binding protein (G protein), alpha 13b. (378 aa)    
Predicted Functional Partners:
lpar1
Lysophosphatidic acid receptor 1; Belongs to the G-protein coupled receptor 1 family.
    
 0.953
arhgef1
Rho guanine nucleotide exchange factor (GEF) 1b.
    
 0.950
arhgef11
Rho guanine nucleotide exchange factor (GEF) 11.
    
 0.950
arhgef12
Rho guanine nucleotide exchange factor (GEF) 12a.
    
 0.948
ENSLBEP00000034531
DH domain-containing protein.
    
 0.948
ENSLBEP00000029050
Thromboxane A2 receptor.
    
 0.930
ENSLBEP00000028772
Apelin receptor b; Belongs to the G-protein coupled receptor 1 family.
    
  0.924
LOC109983338
Apelin receptor a; Belongs to the G-protein coupled receptor 1 family.
    
  0.924
LOC109997068
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
   
 0.922
LOC109980570
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 0.922
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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