STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmc2-2COX assembly mitochondrial protein 2 homolog. (78 aa)    
Predicted Functional Partners:
LOC109991743
Uncharacterized protein.
   
 
 0.650
pum1
Pumilio RNA-binding family member 1.
    
   0.599
pum2
Pumilio RNA-binding family member 2.
    
   0.599
cmc4
Uncharacterized protein.
     
 0.573
LOC109982627
Cytochrome c oxidase copper chaperone COX17.
   
 
 0.564
aasdh
Aminoadipate-semialdehyde dehydrogenase.
      
 0.517
chchd7
Coiled-coil-helix-coiled-coil-helix domain containing 7.
   
 
 0.490
LOC109994833
Cytochrome c oxidase assembly factor COX19.
     
 0.479
LOC109997327
Uncharacterized protein.
      
 0.475
cmc1
COX assembly mitochondrial protein.
   
 
 0.468
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.