STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000009724Rieske domain-containing protein. (308 aa)    
Predicted Functional Partners:
gart
Phosphoribosylglycinamide formyltransferase.
    
  0.859
LOC109994457
Malate synthase-like.
    
  0.840
LOC109987455
Cytochrome b5 reductase 4.
   
  0.840
CMAS
Cytidine monophosphate N-acetylneuraminic acid synthetase.
     
 0.738
nanp
N-acetylneuraminic acid phosphatase.
    
 0.737
LOC109994407
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
  0.714
LOC109992753
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
  0.714
ppat
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
  0.610
LOC109998059
N-acetylneuraminic acid synthase a.
     
 0.571
LOC109998065
AFP-like domain-containing protein.
     
 0.571
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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