STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109994112Si:dkey-16l2.16. (209 aa)    
Predicted Functional Partners:
ENSLBEP00000030805
DENN/MADD domain containing 1A.
    
 0.976
LOC109998174
Si:dkey-76b14.2.
    
 0.947
dennd1b
DENN/MADD domain containing 1B.
    
 0.947
LOC109975849
DOC domain-containing protein.
    
 0.919
anapc10
Anaphase promoting complex subunit 10.
    
 0.919
hspb11
Zgc:158640.
    
 0.919
ift88
Intraflagellar transport 88 homolog.
    
 0.914
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.907
cluap1
Clusterin associated protein 1.
    
 0.894
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.876
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.