STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110001060Uncharacterized protein. (1580 aa)    
Predicted Functional Partners:
ENSLBEP00000024292
LSDAT_euk domain-containing protein.
     
0.832
nudt9
Nudix (nucleoside diphosphate linked moiety X)-type motif 9.
 
   
 0.775
MLKL
Mixed lineage kinase domain like pseudokinase.
    
  0.657
LOC109997068
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
 
 0.648
LOC109980570
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
 
 0.648
LOC109995047
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
 
 0.648
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.609
LOC109992897
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.609
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.609
LOC109988168
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.609
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.