STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109996136F-box protein 36b. (300 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.935
tekt3
Tektin 3.
   
  
 0.848
ankef1
Ankyrin repeat and EF-hand domain containing 1a.
   
 
  0.814
tsnaxip1
TSNAXIP1_N domain-containing protein.
   
  
 0.810
drc3
Dynein regulatory complex subunit 3.
   
 
  0.810
LOC110001607
Radial spoke head component 4A.
   
    0.808
ENSLBEP00000000424
Uncharacterized protein.
   
    0.723
ENSLBEP00000001556
Uncharacterized protein.
   
    0.723
LOC109979241
Adenylate kinase 7b.
   
    0.723
ENSLBEP00000020731
Adenylate kinase 7a.
   
    0.723
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.