STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109993561Solute carrier family 26 member 6. (704 aa)    
Predicted Functional Partners:
lyrm4
Si:ch211-152c8.4; Belongs to the complex I LYR family.
    
 
 0.740
LOC109978647
Heme-binding protein soul4.
   
 
 0.735
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
     
 0.718
rxfp2
Relaxin family peptide receptor 2a.
     
 0.718
LOC110004382
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
 0.718
LOC110001754
Relaxin family peptide receptor 1.
     
 0.718
gatb
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
  0.696
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
   0.693
ENSLBEP00000007600
Uncharacterized protein.
  
 
 0.670
ENSLBEP00000007705
annotation not available
  
 
 0.670
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.