STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nsmce2NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (230 aa)    
Predicted Functional Partners:
nsmce1
NSE1 homolog, SMC5-SMC6 complex component.
    
 0.999
LOC109997953
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
    
 0.999
smc5
Structural maintenance of chromosomes 5.
    
 0.991
ENSLBEP00000030678
AAA_23 domain-containing protein.
    
 0.991
ENSLBEP00000003922
Uncharacterized protein.
    
 0.986
LOC109999784
Calcyon neuron-specific vesicular protein.
    
 0.986
LOC109977420
Structural maintenance of chromosomes 6.
    
 0.986
LOC109983279
Si:dkey-119f1.1.
    
 0.986
LOC110000318
Necdin-like 2.
    
 0.986
RBM20
RNA binding motif protein 20.
    
 0.950
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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