STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhl3Four and a half LIM domains 3a. (309 aa)    
Predicted Functional Partners:
VANGL1
Vang-like protein.
   
 0.701
LOC109975995
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.697
LOC109990925
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.697
VANGL2
Vang-like protein.
    
 0.686
LOC109999476
Vang-like protein.
    
 0.686
dvl1
Dishevelled segment polarity protein 1a.
    
 0.685
dvl3
Dishevelled segment polarity protein 3a.
    
 0.685
dvl2
Dishevelled segment polarity protein 2.
    
 0.685
LOC109986402
Afadin, adherens junction formation factor a.
    
 0.609
LOC109995112
TNF receptor-associated factor.
    
 0.574
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.