STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109997533Si:dkey-16p21.7. (884 aa)    
Predicted Functional Partners:
CDC25B
Cell division cycle 25B.
    
 
 0.899
wee1
Wee1-like protein kinase.
   
0.893
LOC109988311
Wee1-like protein kinase.
   
0.893
pkmyt1
Protein kinase, membrane associated tyrosine/threonine 1.
   
0.893
LOC109976420
Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 0.833
LOC109998366
Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 0.833
nap1l1
Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.718
LOC109989772
Nucleosome assembly protein 1-like 4a; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.718
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
    
   0.709
p2rx4
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family.
    
 
 0.652
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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