STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap77Cilia and flagella associated protein 77. (260 aa)    
Predicted Functional Partners:
ENSLBEP00000034002
Si:dkeyp-46h3.1.
   
   0.822
efhb
Uncharacterized protein.
   
   0.816
ENSLBEP00000035875
Si:ch211-226m7.4.
   
   0.810
enkur
Enkurin, TRPC channel interacting protein.
   
   0.809
cunh1orf194
Uncharacterized protein.
   
   0.809
cfap126
Cilia and flagella associated protein 126.
   
   0.807
fam183a
Family with sequence similarity 183 member A.
    
   0.802
ENSLBEP00000024143
Sperm associated antigen 8.
    
   0.802
wdr90
WD repeat domain 90.
    
   0.731
pacrg
PARK2 co-regulated.
   
   0.720
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.