STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCC1EF-hand and coiled-coil domain containing 1. (373 aa)    
Predicted Functional Partners:
LOC109995739
ACB domain-containing protein.
   
    0.723
acbd5
Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.
   
    0.723
LOC109988803
Acyl-CoA binding domain containing 4.
   
    0.723
LOC109989245
PET100 cytochrome c oxidase chaperone.
      
 0.548
acbd6
Acyl-CoA binding domain containing 6.
   
    0.495
ENSLBEP00000008843
Acyl-CoA binding domain containing 7.
   
    0.495
ENSLBEP00000016716
Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).
   
    0.495
eci2
Enoyl-CoA delta isomerase 2.
   
    0.495
DBI
ACB domain-containing protein.
   
    0.495
polr2k
Polymerase (RNA) II (DNA directed) polypeptide K.
      
 0.457
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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