STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vsig10Uncharacterized protein. (505 aa)    
Predicted Functional Partners:
ENSLBEP00000029664
Protein kinase domain-containing protein.
    
 0.748
ankrd13d
Ankyrin repeat domain 13 family, member D.
      
 0.557
tepsin
TEPSIN adaptor related protein complex 4 accessory protein.
      
 0.555
ttc17
Tetratricopeptide repeat domain 17.
      
 0.552
lyplal1
Lysophospholipase like 1.
      
 0.491
nprl2
NPR2 like, GATOR1 complex subunit.
      
 0.485
bub3
BUB3 mitotic checkpoint protein.
     
 0.460
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
   
 
  0.456
ENSLBEP00000022791
Uncharacterized protein.
      
 0.435
polr3d
Polymerase (RNA) III (DNA directed) polypeptide D.
      
 0.424
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.