STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxl15F-box and leucine-rich repeat protein 15. (292 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.991
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.971
rbx1
Zf-rbx1 domain-containing protein.
    
 0.892
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.830
LOC109989856
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.830
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.804
LOC109989976
Cryptochrome circadian regulator 1b.
    
 0.791
LOC109996375
Cryptochrome circadian regulator 3a.
    
 0.791
LOC110002295
Cryptochrome circadian regulator 5.
    
 0.791
LOC109989699
Cryptochrome circadian regulator 2.
    
 0.791
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.